LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-125a-5p


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Gene
miRNA
Score
DIANA Links
chr22-38_28785274-29006793.1
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623644
Biotype: lincRNA
Gene id: ENSG00000279978
Gene Name: chr22-38_28785274-29006793.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
68359-68384
0.025
3
8mer
188813-188827
0.017
1
8mer
233514-233528
0.015
1
9mer
182839-182863
0.013
3
8mer
60852-60875
0.012
1
7mer
123880-123902
0.009
11
7mer
124935-124956
0.009
9
7mer
106034-106041
0.008
1
8mer
115979-115999
0.008
1
8mer
88886-88904
0.008
0
7mer
82976-83003
0.008
5
7mer
192020-192035
0.008
1
7mer
104373-104398
0.007
1
7mer
210352-210370
0.007
0
8mer
253094-253100
0.006
1
7mer
40659-40686
0.006
1
7mer
179315-179336
0.005
5
7mer
207298-207303
0.005
7
7mer
82683-82699
0.005
4
8mer
239778-239801
0.005
1
7mer
107251-107262
0.004
3
7mer
223910-223923
0.004
0
7mer
89974-90000
0.004
1
8mer
236868-236887
0.004
1
9mer
98086-98105
0.003
0
7mer
87965-87985
0.003
1
7mer
234594-234614
0.003
1
7mer
229647-229669
0.003
0
7mer
21935-21953
0.003
5
7mer
185058-185082
0.003
1
7mer
252961-252977
0.003
2
7mer
188145-188169
0.003
1
6mer
100684-100704
0.003
6
7mer
39566-39588
0.003
0
7mer
209612-209637
0.003
1
7mer
109288-109311
0.003
1
7mer
8335-8353
0.002
3
6mer
15118-15140
0.002
1
7mer
43383-43408
0.002
1
6mer
163487-163513
0.002
8
7mer
205348-205367
0.002
1
6mer
86447-86463
0.002
7
8mer+wobble
8501-8521
0.002
1
7mer
238618-238639
0.002
1
7mer
255125-255146
0.002
0
7mer
73906-73917
0.002
1
7mer
218072-218096
0.002
1
7mer
204981-205005
0.002
0
7mer
52594-52615
0.002
Not Conserved
6mer
181615-181630
0.002
2
6mer
92726-92743
0.002
1
6mer
60640-60666
0.002
2
6mer
124657-124676
0.002
5
6mer
130402-130423
0.002
5
6mer
19093-19100
0.002
1
6mer
89274-89300
0.002
1
6mer
145032-145047
0.002
1
6mer
241606-241623
0.002
1
6mer
67176-67201
0.002
0
6mer
227882-227897
0.002
3
6mer
198056-198071
0.002
0
6mer
126229-126250
0.002
3
7mer
130886-130906
0.002
3
6mer
216349-216375
0.002
3
6mer
207434-207454
0.002
7
6mer
94360-94365
0.002
1
6mer
165339-165365
0.001
2
6mer
118678-118698
0.001
3
6mer
128595-128617
0.001
1
6mer
194860-194864
0.001
0
6mer
88291-88305
0.001
4
6mer
178372-178398
0.001
2
6mer
87256-87260
0.001
1
6mer
150603-150619
0.001
4
6mer
112537-112554
0.001
1
6mer
220823-220849
0.001
2
6mer
211748-211768
0.001
3
6mer
117094-117114
0.001
0
6mer
72531-72545
0.001
3
6mer
153332-153350
0.001
1
6mer
66398-66422
0.001
0
6mer
212356-212378
0.001
5
6mer
9961-9986
0.001
0
6mer
132801-132822
0.001
2
6mer
35460-35477
0.001
1
6mer
74733-74758
0.001
10
6mer
55667-55679
0.001
1
6mer
47120-47124
0.001
1
6mer
214611-214622
0.001
1
6mer
181822-181839
0.001
0
6mer
111988-112012
0.001
0
6mer
185591-185617
0.001
1
6mer
41767-41787
0.001
0
6mer
76885-76906
0.001
1
6mer
124298-124316
0.001
1
6mer
30309-30335
0.001
0
6mer
147972-147993
0.001
1
6mer
189838-189859
0.001
0
6mer
217359-217381
0.001
2
6mer
242358-242381
0.001
0
6mer
58649-58676
0.001
1
6mer
234741-234766
0.001
Not Conserved
6mer
117761-117785
0.001
0
6mer
22975-22990
0.001
1
6mer
45206-45229
0.001
Not Conserved
6mer
180232-180244
0.001
1
6mer
21115-21138
0.001
1
6mer
39346-39367
0.001
1
6mer
10967-10990
0.001
1
6mer
62349-62372
0.001
0
6mer
185487-185496
0.001
0
6mer
227672-227686
0.001
0
6mer
120662-120684
0.001
0
6mer
78955-78980
0.001
1
6mer
216857-216876
0.001
1
6mer
226019-226035
0.001
0
6mer
259869-259887
0.001
1
6mer
238936-238960
0.001
1
6mer
141379-141401
0.001
1
6mer
29587-29601
0.001
1
6mer
24027-24051
0.001
0
8mer+mismatch
175469-175495
0.001
Not Conserved
6mer
109006-109026
0.001
1
6mer
29639-29661
0.001
1
6mer
112859-112877
0.001
0
6mer
211774-211795
0.001
6
6mer
238508-238531
0.001
0
6mer
74656-74675
0.001
1
6mer
242111-242131
0.001
0
6mer
239607-239630
0.001
0
6mer
189921-189942
0.001
0
6mer
88036-88054
0.001
2
6mer
190371-190394
0.001
Not Conserved
6mer
190257-190282
0.000
0
6mer
190174-190195
0.000
0
6mer
190089-190110
0.000
0
6mer
120769-120795
0.000
2
6mer
190033-190054
0.000
1
6mer
190344-190365
0.000
0
6mer
252985-253008
0.000
1
6mer
189977-189998
0.000
0
6mer
190118-190139
0.000
0
6mer
190232-190253
0.000
0
6mer
190203-190224
0.000
1
6mer
74764-74784
0.000
1
6mer
52635-52660
0.000
0
6mer
117188-117207
0.000
1
6mer
207496-207509
0.000
2
6mer
255163-255187
0.000
1
6mer
255175-255195
0.000
1
XLOC_013024
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00026972
Biotype: transcript isomorph
Gene id: XLOC_013024
Gene Name: XLOC_013024
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
452-474
0.151
0
8mer
205-232
0.150
0
XLOC_009645
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020306
Biotype: transcript isomorph
Gene id: XLOC_009645
Gene Name: XLOC_009645
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
Fibroblasts Lung Normal/Primary
A549 Lung Cancer/Malignant
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1547-1558
0.131
0
8mer
1346-1352
0.112
0
7mer
1414-1433
0.026
0
7mer
1254-1273
0.006
Not Conserved
RP11-20D14.6
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000514568
Biotype: lincRNA
Gene id: ENSG00000249790
Gene Name: RP11-20D14.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1769-1780
0.134
0
8mer
1568-1574
0.097
0
7mer
1636-1655
0.028
0
7mer
1476-1495
0.007
Not Conserved
RP11-215G15.5
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000607560
Biotype: lincRNA
Gene id: ENSG00000272016
Gene Name: RP11-215G15.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
169-186
0.224
7
7mer
3358-3363
0.021
7
LINC00661
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000552608
Biotype: lincRNA
Gene id: ENSG00000205396
Gene Name: LINC00661
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
931-958
0.236
1
6mer
605-623
0.003
0
LINC00661
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000549354
Biotype: lincRNA
Gene id: ENSG00000205396
Gene Name: LINC00661
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
3143-3170
0.172
1
6mer
2576-2587
0.003
0
6mer
1345-1364
0.003
1
6mer
918-936
0.002
0
RP11-111F5.4
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000377518
Biotype: retained_intron
Gene id: ENSG00000204802
Gene Name: RP11-111F5.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2482-2503
0.059
0
7mer
2360-2385
0.034
0
7mer
1904-1924
0.025
0
7mer
2053-2074
0.025
0
7mer
1700-1727
0.016
0
6mer
494-519
0.010
0
6mer
1746-1766
0.005
0
KCNQ1OT1
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000597346
Biotype: antisense
Gene id: ENSG00000269821
Gene Name: KCNQ1OT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
35467-35483
0.013
0
9mer
43211-43232
0.011
0
7mer
48193-48212
0.010
3
7mer
68791-68811
0.008
0
7mer
8349-8355
0.007
Not Conserved
7mer
72534-72560
0.007
2
7mer
20048-20063
0.007
1
8mer
56935-56947
0.006
1
8mer
54942-54961
0.006
1
7mer
23266-23290
0.005
1
7mer
9445-9460
0.005
1
7mer
2500-2520
0.004
1
7mer
31808-31834
0.003
0
7mer
64818-64842
0.003
1
7mer
87230-87255
0.003
1
7mer
54229-54252
0.002
1
7mer
19137-19157
0.002
1
6mer
67366-67392
0.002
3
7mer
5170-5176
0.002
1
6mer
20406-20410
0.002
0
7mer
82986-83005
0.002
0
7mer
76592-76611
0.002
0
6mer
85004-85026
0.002
4
6mer
62324-62348
0.002
1
6mer
56645-56671
0.002
4
6mer
42696-42715
0.002
3
6mer
90677-90698
0.002
1
6mer
78067-78094
0.002
1
6mer
30503-30527
0.001
0
6mer
58463-58472
0.001
1
6mer
52355-52378
0.001
1
6mer
63484-63501
0.001
1
6mer
78662-78676
0.001
1
6mer
58013-58037
0.001
2
6mer
76690-76706
0.001
1
6mer
18398-18417
0.001
1
6mer
83284-83299
0.001
1
6mer
48044-48066
0.001
2
6mer
37137-37157
0.001
0
6mer
82469-82490
0.001
1
6mer
65315-65337
0.001
2
6mer
73470-73483
0.001
0
6mer
80676-80701
0.001
1
6mer
83963-83984
0.001
1
6mer
90379-90402
0.001
1
6mer
65760-65782
0.001
2
6mer
79207-79227
0.001
1
6mer
27922-27938
0.001
0
6mer
56367-56392
0.001
1
6mer
84397-84424
0.001
1
8mer
83258-83281
0.001
1
6mer
48762-48787
0.001
0
6mer
73025-73042
0.001
2
6mer
81556-81578
0.001
1
6mer
71431-71453
0.001
1
6mer
81191-81212
0.001
0
6mer
74310-74331
0.001
0
6mer
63741-63764
0.001
2
6mer
76070-76091
0.001
1
6mer
57167-57193
0.001
2
6mer
47451-47475
0.001
1
6mer
55788-55801
0.001
1
6mer
83704-83730
0.001
2
6mer
63655-63677
0.001
1
6mer
72420-72440
0.001
0
6mer
44926-44942
0.001
1
6mer
75516-75535
0.001
1
6mer
79117-79139
0.001
1
6mer
59435-59459
0.001
1
6mer
44858-44868
0.001
1
6mer
83105-83127
0.001
2
6mer
67345-67371
0.000
2
6mer
65224-65249
0.000
2
6mer
56917-56941
0.000
0
6mer
84998-85019
0.000
1
AC006548.28
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623130
Biotype: sense_overlapping
Gene id: ENSG00000280156
Gene Name: AC006548.28
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
23158-23178
0.016
1
8mer
83477-83497
0.009
1
7mer
12566-12591
0.008
7
8mer
59891-59897
0.008
1
8mer
75722-75743
0.007
0
6mer
101-125
0.006
1
7mer
31737-31758
0.005
1
7mer
28410-28432
0.005
1
7mer
65388-65409
0.005
1
7mer
28667-28687
0.004
1
8mer
10802-10826
0.004
1
7mer
64769-64784
0.004
0
7mer
77761-77776
0.004
0
7mer
32617-32641
0.004
1
7mer
3900-3921
0.003
1
7mer
33416-33441
0.003
0
8mer
18172-18196
0.003
1
7mer
52006-52032
0.003
Not Conserved
7mer
39334-39361
0.002
0
6mer
83872-83877
0.002
1
6mer
63720-63742
0.002
1
8mer
82043-82069
0.002
0
6mer
18834-18856
0.002
2
6mer
84005-84027
0.002
1
6mer
73231-73244
0.002
Not Conserved
7mer
59557-59562
0.002
1
7mer
23432-23456
0.002
0
6mer
24526-24551
0.002
0
6mer
6093-6103
0.002
1
6mer
43292-43309
0.002
3
6mer
12226-12247
0.001
1
6mer
69124-69129
0.001
0
6mer
36585-36602
0.001
2
6mer
23465-23489
0.001
1
6mer
17360-17386
0.001
2
6mer
16068-16087
0.001
1
7mer
74725-74750
0.001
0
6mer
57658-57680
0.001
1
6mer
9496-9517
0.001
1
6mer
20500-20510
0.001
1
6mer
24007-24029
0.001
1
7mer
25605-25625
0.001
0
6mer
58904-58912
0.001
1
6mer
14856-14878
0.001
1
6mer
48625-48641
0.001
Not Conserved
6mer
78252-78277
0.001
0
6mer
22196-22216
0.001
2
6mer
71672-71688
0.001
0
6mer
82568-82585
0.001
0
6mer
51662-51678
0.001
Not Conserved
6mer
61173-61191
0.001
0
6mer
64162-64185
0.001
1
6mer
10723-10748
0.001
2
6mer
11602-11624
0.001
0
6mer
35082-35097
0.001
1
7mer
45406-45426
0.001
Not Conserved
6mer
15630-15654
0.001
1
7mer
11755-11774
0.001
0
6mer
41854-41876
0.001
1
6mer
74637-74655
0.001
0
6mer
62701-62722
0.001
1
6mer
65674-65695
0.001
0
6mer
38314-38334
0.001
0
6mer
18448-18474
0.001
0
6mer
39859-39881
0.001
1
6mer
60850-60876
0.001
1
6mer
23712-23733
0.001
1
6mer
60721-60748
0.001
1
6mer
11952-11977
0.001
1
6mer
39751-39775
0.001
1
6mer
65565-65583
0.001
1
6mer
39264-39281
0.000
0
6mer
5837-5858
0.000
1
6mer
11798-11824
0.000
0
6mer
9481-9500
0.000
1
RP11-440L14.4
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000607877
Biotype: antisense
Gene id: ENSG00000272588
Gene Name: RP11-440L14.4
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
303-330
0.158
1
MUC19
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000454784
Biotype: processed_transcript
Gene id: ENSG00000205592
Gene Name: MUC19
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
23550-23569
0.006
1
7mer
5929-5950
0.005
2
7mer
8448-8464
0.004
2
7mer
8325-8344
0.004
1
7mer
9581-9601
0.003
0
7mer
7675-7687
0.003
0
7mer
6690-6709
0.003
1
7mer
8835-8851
0.003
2
7mer
9671-9691
0.003
1
6mer
817-839
0.002
2
7mer
6839-6859
0.002
2
7mer
6360-6379
0.002
1
7mer
6383-6409
0.002
2
7mer
6248-6268
0.002
1
6mer
6189-6208
0.002
2
7mer
12370-12382
0.002
Not Conserved
7mer
9701-9721
0.002
2
7mer
7224-7240
0.001
1
7mer
9854-9871
0.001
1
7mer
9618-9631
0.001
1
7mer
13290-13307
0.001
Not Conserved
6mer
21179-21202
0.001
1
7mer
6891-6910
0.001
1
7mer
10811-10828
0.001
Not Conserved
7mer
9104-9121
0.001
0
7mer
6449-6469
0.001
1
7mer
6510-6529
0.001
0
6mer
7131-7150
0.001
0
6mer
17788-17804
0.001
Not Conserved
6mer
20328-20353
0.001
1
6mer
13431-13457
0.001
0
6mer
15060-15077
0.001
0
6mer
22188-22210
0.001
1
6mer
10931-10948
0.001
0
6mer
17992-18014
0.001
0
6mer
11111-11128
0.001
0
6mer
9975-9991
0.001
1
6mer
8057-8074
0.001
1
6mer
19118-19133
0.001
1
6mer
16251-16277
0.001
0
6mer
17371-17387
0.001
0
6mer
16288-16307
0.001
0
6mer
13708-13727
0.001
Not Conserved
6mer
16380-16397
0.001
Not Conserved
6mer
6233-6238
0.001
1
6mer
14788-14807
0.001
Not Conserved
6mer
17571-17597
0.001
0
6mer
17031-17057
0.001
0
6mer
13134-13160
0.001
0
6mer
9071-9091
0.001
1
6mer
10121-10141
0.001
0
6mer
17667-17684
0.001
Not Conserved
6mer
16021-16037
0.001
0
6mer
11022-11038
0.001
0
6mer
15601-15617
0.001
0
6mer
18028-18044
0.001
0
6mer
10635-10651
0.001
0
6mer
10305-10321
0.001
0
6mer
9764-9784
0.001
Not Conserved
6mer
11976-11995
0.001
0
6mer
14221-14237
0.001
0
6mer
11737-11758
0.001
1
6mer
10182-10201
0.001
1
6mer
17491-17507
0.001
0
6mer
10062-10081
0.001
0
6mer
7727-7747
0.001
1
6mer
12511-12530
0.001
Not Conserved
6mer
16438-16457
0.001
Not Conserved
6mer
18238-18254
0.001
0
6mer
18088-18104
0.001
0
6mer
8144-8164
0.001
1
6mer
13173-13190
0.001
0
6mer
14632-14657
0.001
Not Conserved
6mer
9125-9151
0.001
1
6mer
12039-12055
0.001
0
6mer
11798-11818
0.001
0
6mer
12570-12590
0.001
0
6mer
14488-14507
0.001
0
6mer
10601-10621
0.001
0
6mer
15811-15827
0.001
1
6mer
14011-14027
0.001
0
6mer
17607-17627
0.001
0
6mer
10545-10561
0.001
0
6mer
13050-13070
0.001
0
6mer
10145-10171
0.001
1
6mer
16612-16637
0.001
0
6mer
15508-15527
0.001
0
6mer
16951-16967
0.001
0
6mer
12784-12800
0.001
0
6mer
11889-11905
0.001
0
6mer
15658-15677
0.001
Not Conserved
6mer
11202-11218
0.001
0
6mer
13858-13877
0.001
Not Conserved
6mer
9995-10021
0.001
1
6mer
10421-10441
0.001
0
6mer
12835-12860
0.001
1
6mer
12066-12085
0.001
0
6mer
15387-15407
0.001
0
6mer
10449-10471
0.000
0
6mer
16709-16727
0.000
Not Conserved
6mer
16051-16067
0.000
0
6mer
15211-15227
0.000
0
6mer
10215-10231
0.000
1
6mer
12129-12145
0.000
0
6mer
11439-11458
0.000
0
6mer
18264-18284
0.000
0
6mer
16891-16907
0.000
0
6mer
14241-14267
0.000
0
6mer
18137-18164
0.000
0
6mer
14581-14597
0.000
0
6mer
13801-13817
0.000
0
6mer
11762-11788
0.000
0
6mer
16320-16337
0.000
Not Conserved
6mer
15087-15107
0.000
0
6mer
11832-11848
0.000
0
6mer
15360-15377
0.000
0
6mer
17431-17447
0.000
0
6mer
14038-14057
0.000
0
6mer
11946-11965
0.000
0
6mer
15838-15857
0.000
0
6mer
15231-15257
0.000
0
6mer
17158-17177
0.000
0
6mer
11171-11188
0.000
0
6mer
11592-11608
0.000
0
6mer
16801-16817
0.000
0
6mer
11618-11638
0.000
Not Conserved
6mer
11464-11488
0.000
0
6mer
17398-17417
0.000
0
6mer
12874-12890
0.000
0
6mer
12713-12740
0.000
Not Conserved
6mer
10694-10711
0.000
Not Conserved
6mer
18118-18134
0.000
0
6mer
15960-15977
0.000
0
6mer
13560-13577
0.000
0
6mer
17183-17207
0.000
0
6mer
11048-11068
0.000
Not Conserved
6mer
11652-11668
0.000
0
6mer
13891-13907
0.000
0
6mer
9797-9814
0.000
1
6mer
11919-11935
0.000
0
6mer
16651-16667
0.000
0
6mer
12691-12710
0.000
Not Conserved
6mer
17128-17147
0.000
Not Conserved
6mer
17101-17117
0.000
0
6mer
14330-14357
0.000
0
6mer
16561-16577
0.000
0
6mer
16498-16517
0.000
Not Conserved
6mer
14671-14687
0.000
0
6mer
10665-10681
0.000
0
6mer
17844-17864
0.000
0
6mer
11532-11548
0.000
0
6mer
13021-13040
0.000
Not Conserved
6mer
17251-17267
0.000
0
6mer
12179-12205
0.000
0
6mer
12009-12025
0.000
0
6mer
12810-12830
0.000
0
6mer
16763-16787
0.000
Not Conserved
6mer
10272-10291
0.000
Not Conserved
6mer
16100-16127
0.000
0
6mer
14160-14177
0.000
0
6mer
14930-14957
0.000
0
6mer
12964-12980
0.000
0
6mer
16738-16757
0.000
Not Conserved
6mer
13827-13847
0.000
Not Conserved
6mer
11262-11278
0.000
0
6mer
12904-12920
0.000
0
6mer
9827-9844
0.000
0
6mer
18048-18074
0.000
0
6mer
14607-14627
0.000
Not Conserved
6mer
15147-15167
0.000
Not Conserved
6mer
14881-14897
0.000
Not Conserved
6mer
15721-15737
0.000
0
6mer
15691-15707
0.000
0
6mer
17281-17297
0.000
0
6mer
13201-13220
0.000
0
6mer
11409-11428
0.000
0
6mer
17908-17924
0.000
0
6mer
13921-13937
0.000
0
6mer
16671-16697
0.000
0
6mer
11322-11338
0.000
0
6mer
14120-14147
0.000
0
6mer
12209-12235
0.000
Not Conserved
6mer
17068-17087
0.000
Not Conserved
6mer
17818-17834
0.000
0
6mer
10959-10978
0.000
0
6mer
14400-14417
0.000
Not Conserved
6mer
15871-15887
0.000
0
6mer
10395-10411
0.000
Not Conserved
6mer
11382-11398
0.000
0
6mer
12994-13010
0.000
0
6mer
13471-13487
0.000
0
6mer
10482-10501
0.000
0
6mer
12158-12175
0.000
0
6mer
10982-11008
0.000
0
6mer
13498-13517
0.000
Not Conserved
6mer
15271-15287
0.000
0
6mer
10722-10741
0.000
1
6mer
15901-15917
0.000
Not Conserved
6mer
16587-16607
0.000
Not Conserved
6mer
15112-15137
0.000
Not Conserved
6mer
14281-14297
0.000
0
6mer
11348-11368
0.000
0
6mer
11288-11308
0.000
0
6mer
15748-15767
0.000
Not Conserved
6mer
14811-14837
0.000
0
6mer
14071-14087
0.000
0
6mer
15412-15437
0.000
Not Conserved
RP11-348N5.9
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000619110
Biotype: antisense
Gene id: ENSG00000278601
Gene Name: RP11-348N5.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
115-135
0.154
2
LINC00987
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: NR_036466.1
Biotype: lincRNA
Gene id: NR_036466.1 (gene)
Gene Name: LINC00987
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HeLa Cervix Cancer/Malignant
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2058-2078
0.091
7
8mer
2257-2284
0.053
4
7mer
376-386
0.004
0
7mer
1479-1499
0.003
Not Conserved
LINC00987
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000427111
Biotype: lincRNA
Gene id: ENSG00000237248
Gene Name: LINC00987
UCSC graphic:
Expression:
  Cell Line Tissue Category
HeLa Cervix Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2058-2078
0.091
7
8mer
2257-2284
0.053
4
7mer
376-386
0.004
0
7mer
1479-1499
0.003
Not Conserved
RP11-15H20.6
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000601239
Biotype: retained_intron
Gene id: ENSG00000213971
Gene Name: RP11-15H20.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2294-2308
0.145
1
LCMT1-AS2
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000565214
Biotype: antisense
Gene id: ENSG00000260034
Gene Name: LCMT1-AS2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
5-27
0.061
1
8mer
349-374
0.034
0
7mer
2785-2806
0.020
1
6mer
5372-5398
0.011
1
6mer
437-458
0.005
0
8mer
2690-2716
0.004
0
6mer
4783-4803
0.003
0
6mer
2052-2056
0.002
0
6mer
4125-4151
0.002
0
LINC01224
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000596763
Biotype: lincRNA
Gene id: ENSG00000269416
Gene Name: LINC01224
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
23-42
0.141
1
GLIDR
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: NR_015363.1
Biotype: lincRNA
Gene id: NR_015363.1 (gene)
Gene Name: GLIDR
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2480-2501
0.061
1
7mer
2358-2383
0.034
1
7mer
1680-1707
0.016
1
6mer
474-499
0.010
1
7mer
1884-1904
0.007
0
7mer
2033-2054
0.007
0
6mer
1726-1746
0.005
1
XLOC_007690
hsa-miR-125a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00015562
Biotype: transcript isomorph
Gene id: XLOC_007690
Gene Name: XLOC_007690
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
- Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
Fibroblasts Lung Normal/Primary
- Lymph Node Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-125a-5p
Sequence: ucccugagacccuuuaaccuguga
MirBase ID: MIMAT0000443
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2879-2900
0.061
1
7mer
2757-2782
0.034
1
7mer
2042-2069
0.015
1
7mer
2246-2266
0.007
0
7mer
2395-2416
0.007
0
6mer
836-861
0.006
1
6mer
2088-2108
0.004
1
6mer
290-316
0.003
Not Conserved
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